Instructions for using T4 Gene 32 Protein are provided in the corresponding kit protocol in the resources below.
Quality Control
DNA binding of single stranded DNA by T4 Gene 32 Protein was measured using a gel shift assay with a single-stranded, fluorescently labeled oligonucleotide. Serial dilutions of the enzyme were made in 1X T4 GP32 reaction buffer (50 mM potassium acetate, 20 mM Tris-acetate, 10 mM magnesium acetate, 1 mM DTT; pH 7.9) and added to 10 μL reactions containing a 5’-FAM–labeled oligonucleotide substrate, and 1X T4 GP32 Reaction Buffer. Reactions were incubated for 20 minutes at 37°C, plunged on ice, and run out on a 15% TBE-Urea gel. DNA binding ability was observed as a band shift in the apparent molecular weight of the oligonucleotide on the TBE-Urea gel.
Protein concentration (OD280) of T4 Gene 32 Protein was determined by OD280 absorbance.
Physical Purity of the product was evaluated by SDS-PAGE of concentrated and diluted enzyme solutions followed by silver stain detection. Purity was assessed by comparing the aggregate mass of contaminant bands in the concentrated sample to the mass of the protein of interest band in the diluted sample.
Single-stranded exonuclease activity was determined in a 50 μL reaction containing a radiolabeled single-stranded DNA substrate and 10 μL of solution incubated for 4 hours at 37°C.
Double-stranded exonuclease activity was determined in a 50 μL reaction containing a radiolabeled double-stranded DNA substrate and 10 μL of protein solution incubated for 4 hours at 37°C.
Double-stranded endonuclease activity was determined in a 50 μL reaction containing 0.5 μg of plasmid DNA and 10 μL of protein solution incubated for 4 hours at 37°C.
E. coli contamination was evaluated using 5 μL replicate samples of protein solution denatured and screened in a TaqMan qPCR assay for the presence of contaminating E. coli genomic DNA using oligonucleotide primers corresponding to the 16S rRNA locus.